\(\newcommand{L}[1]{\| #1 \|}\newcommand{VL}[1]{\L{ \vec{#1} }}\newcommand{R}[1]{\operatorname{Re}\,(#1)}\newcommand{I}[1]{\operatorname{Im}\, (#1)}\)

Scripting using nipype

• Introducing nipype;
• SPM slice timing exercise;
• the rest of the analysis in SPM:
  • motion correction (registration between first image and later images in time series);
  • coregistration (registration between structural and functional);
  • spatial normalization (registration between structural and template);
  • reslicing (resampling images in to space of template);
  • smoothing;
• Scripting of SPM analysis with nipype.